PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009775416.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 341aa    MW: 36621.1 Da    PI: 5.942
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009775416.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_176.14.5e-24242304163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v++L++eN+aLk+e+ +l++e++kl+se+
  XP_009775416.1 242 ERELKRQKRKQSNRESARRSRLRKQAECEELQQRVETLSNENHALKEEMRKLSEECEKLTSEN 304
                     89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.8E-30193IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1702.2E-19237301No hitNo description
SMARTSM003384.2E-22242306IPR004827Basic-leucine zipper domain
PfamPF001701.4E-21242304IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.507244307IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-11245301No hitNo description
CDDcd147022.25E-23247297No hitNo description
PROSITE patternPS000360249264IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MGAGEESTPA KPSKATSTQE TQATPSYPDW SSSMQAYYGA GAAPHFFSPT VASPTPHPYM  60
WGGQHPLMPP YGAPVPYPAL YPPTGVYAHP NMPMTPNPLQ ANPESDSKAP DPKDQSTSKK  120
LKGYTGGKAG ESGKATSGSG NDGATRSAES GSEGSSDAND ENDNHEFSAN KSRNFDLMLA  180
NGASSQNNPA TGNPVAMPAT NLNIGMDLWN ASSAGPGMIK MRSNQSGVAP APGIGREWIQ  240
DERELKRQKR KQSNRESARR SRLRKQAECE ELQQRVETLS NENHALKEEM RKLSEECEKL  300
TSENNSIKEE LTRLCGPEAV SKLESNANAT HLQSNVEEAN S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1258264RRSRLRK
2258265RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0138730.0BT013873.1 Lycopersicon esculentum clone 132853R, mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009775416.10.0PREDICTED: G-box-binding factor 1-like isoform X1
SwissprotP427741e-107GBF1_ARATH; G-box-binding factor 1
TrEMBLK4B6I30.0K4B6I3_SOLLC; Uncharacterized protein
STRINGSolyc02g062950.2.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA37802446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.21e-101G-box binding factor 1